Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017412.1 Corchorus olitorius cultivar O-4 contig17445, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11637

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--35
2
17.5
2
100
0
70
48
0
0
51
1.00
762--822
30
2.0
30
93
0
104
36
13
11
39
1.80
1188--1223
14
2.6
14
95
4
65
50
0
0
50
1.00
9468--9493
12
2.2
12
100
0
52
0
19
7
73
1.07
10296--10507
104
2.0
104
99
0
415
33
13
16
36
1.87
11323--11637
161
2.0
161
86
7
444
41
11
2
44
1.53

Tables:   1

The End!