Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017420.1 Corchorus olitorius cultivar O-4 contig17453, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  42772

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3081--3114
15
2.3
15
90
5
52
5
17
29
47
1.71
6209--6266
27
2.2
26
93
3
98
37
17
18
25
1.93
7123--7187
34
1.9
34
100
0
130
47
15
15
21
1.82
29247--29271
12
2.1
12
100
0
50
16
0
24
60
1.36
30567--30592
13
2.0
13
100
0
52
30
15
15
38
1.88
37456--37526
30
2.3
31
86
11
110
36
19
12
30
1.89
41536--41604
29
2.3
30
90
2
104
15
30
15
37
1.90
41745--41816
29
2.4
30
88
4
110
40
18
26
15
1.90

Tables:   1

The End!