Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017424.1 Corchorus olitorius cultivar O-4 contig17457, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27856

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1019--1076
24
2.4
24
85
0
80
24
12
39
24
1.89
8392--8434
7
6.3
7
94
5
79
0
13
0
86
0.58
8392--8434
13
3.2
13
96
3
77
0
13
0
86
0.58
8392--8434
20
2.1
21
95
4
79
0
13
0
86
0.58
11641--11896
124
2.1
121
90
5
408
30
16
14
39
1.88
11933--12056
44
2.8
44
87
3
180
39
23
9
27
1.86
16682--16715
2
17.0
2
100
0
68
50
0
0
50
1.00
18148--18180
16
2.1
16
94
0
57
42
24
27
6
1.78
18206--18244
21
1.9
21
89
5
62
58
33
5
2
1.33
20441--20480
15
2.6
16
84
8
55
17
10
12
60
1.59
20814--20879
28
2.4
27
80
9
71
43
6
10
39
1.64
20824--20889
28
2.3
28
82
10
80
30
7
10
51
1.64
26689--26825
50
2.8
47
84
9
168
51
5
14
28
1.66

Tables:   1

The End!