Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017430.1 Corchorus olitorius cultivar O-4 contig17463, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6074

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1188--1300
59
1.9
59
88
3
172
41
14
6
38
1.70
2321--2377
12
4.7
13
79
12
50
47
8
7
36
1.62
2332--2377
13
3.8
13
83
8
53
47
8
6
36
1.60
2517--2555
13
2.8
13
88
7
51
61
12
2
23
1.43
3605--3707
42
2.3
45
80
15
117
12
26
8
52
1.68

Tables:   1

The End!