Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017431.1 Corchorus olitorius cultivar O-4 contig17464, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37244

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
12650--12677
1
28.0
1
100
0
56
100
0
0
0
0.00
16617--16704
44
2.0
44
93
0
149
28
13
18
39
1.88
17797--17834
3
12.7
3
100
0
76
68
0
31
0
0.90
21390--21449
27
2.3
26
79
2
66
46
13
5
35
1.65
22504--22561
25
2.4
24
85
2
71
62
5
5
27
1.38
23278--23532
132
1.9
132
93
1
440
49
2
10
37
1.50
23628--24054
213
2.0
214
93
1
723
21
21
11
44
1.84
26985--27039
4
13.8
4
92
0
56
56
0
1
41
1.10
30860--30910
22
2.2
22
86
6
66
50
15
11
21
1.76
30853--30950
51
1.9
51
89
8
155
50
18
11
20
1.77
30909--30952
21
2.1
21
95
0
79
56
20
9
13
1.64
33278--33324
26
1.9
24
87
12
69
27
27
4
40
1.75
35485--35594
33
3.3
33
98
0
211
40
20
6
32
1.78

Tables:   1

The End!