Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017471.1 Corchorus olitorius cultivar O-4 contig17504, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31657

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13999--14144
74
2.0
73
87
5
213
36
13
10
39
1.80
18786--18833
11
4.5
11
77
15
55
79
16
4
0
0.89
18782--18824
6
7.3
6
85
15
54
81
16
2
0
0.79
18782--18833
22
2.4
21
84
9
61
78
17
3
0
0.89
21282--21329
25
1.9
25
100
0
96
37
20
33
8
1.83
24653--24721
27
2.6
27
85
0
93
17
11
30
40
1.85
28139--28179
21
2.0
21
85
9
57
39
9
14
36
1.79
29535--29576
15
2.7
15
96
3
75
66
14
7
11
1.43

Tables:   1

The End!