Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017473.1 Corchorus olitorius cultivar O-4 contig17506, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26772

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
19789--19864
29
2.6
29
89
0
125
31
26
11
30
1.92
20846--20887
21
2.0
21
100
0
84
19
14
9
57
1.64
21062--21150
45
2.0
46
88
2
135
42
11
20
25
1.85
21326--21488
62
2.6
62
91
0
265
39
21
9
28
1.85
23309--23339
15
2.1
15
93
0
53
51
0
0
48
1.00
24377--24513
22
6.2
22
77
5
143
35
17
10
36
1.84
24377--24513
43
3.1
43
82
7
159
35
17
10
36
1.84
24575--24616
22
1.9
22
95
0
75
40
14
11
33
1.82
24608--24650
22
2.0
22
90
0
68
32
18
11
37
1.87
24665--24786
22
5.7
22
75
14
103
38
11
12
37
1.79
25333--25483
22
6.9
22
77
8
121
40
11
9
38
1.74
26650--26762
6
18.4
7
95
2
105
67
0
0
31
0.97
26665--26764
3
33.3
3
100
0
200
67
0
0
33
0.91

Tables:   1

The End!