Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017475.1 Corchorus olitorius cultivar O-4 contig17508, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13719

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3023--3087
30
2.2
30
83
5
89
36
10
12
40
1.78
4108--4150
11
3.9
11
81
0
59
41
2
0
55
1.12
4113--4157
22
2.0
23
95
4
83
46
4
0
48
1.22
4268--4303
18
1.9
19
88
5
56
0
13
47
38
1.44
8428--8478
3
16.3
3
76
15
50
62
0
0
37
0.95
8431--8479
7
7.1
7
82
13
50
61
0
0
38
0.96
8425--8479
25
2.2
26
90
3
85
61
0
0
38
0.96
11103--11184
39
2.1
39
100
0
164
35
17
7
40
1.77
11182--11283
27
4.0
27
77
12
133
31
14
18
35
1.91

Tables:   1

The End!