Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017479.1 Corchorus olitorius cultivar O-4 contig17512, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9253

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
332--362
16
1.9
16
100
0
62
54
0
12
32
1.38
6952--6992
20
2.2
19
91
8
66
53
7
0
39
1.29
8811--9088
43
6.5
43
85
6
370
41
27
10
21
1.85
8811--9088
84
3.3
85
90
5
420
41
27
10
21
1.85
8811--9099
127
2.3
125
86
4
355
41
27
10
21
1.85
9208--9253
2
23.5
2
95
4
85
47
0
0
52
1.00

Tables:   1

The End!