Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017484.1 Corchorus olitorius cultivar O-4 contig17517, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30887

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1706--1735
9
3.4
9
90
9
53
20
0
0
80
0.72
1703--1742
17
2.4
16
88
8
62
17
2
0
80
0.83
10288--10330
3
14.3
3
95
0
77
34
0
32
32
1.58
11074--11143
34
2.1
34
94
0
122
38
18
10
32
1.84
19365--19421
21
2.6
22
88
2
80
59
26
1
12
1.43
24462--24493
3
10.7
3
100
0
64
31
0
0
68
0.90
26871--26897
11
2.5
11
100
0
54
14
7
33
44
1.73
29907--30058
76
2.0
76
80
10
168
17
28
28
25
1.97

Tables:   1

The End!