Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017497.1 Corchorus olitorius cultivar O-4 contig17530, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22319

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
706--961
128
2.0
128
97
0
485
29
12
23
33
1.92
1722--1791
36
1.9
36
97
0
131
38
11
17
32
1.85
4896--4944
22
2.2
22
100
0
98
42
10
24
22
1.84
6943--7023
27
3.0
26
82
7
90
40
18
23
17
1.91
12057--12103
21
2.3
21
96
3
87
31
4
36
27
1.76
20957--20995
20
2.0
20
100
0
78
35
25
2
35
1.70

Tables:   1

The End!