Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017504.1 Corchorus olitorius cultivar O-4 contig17537, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10861

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
30--58
10
3.0
10
95
5
51
27
0
0
72
0.85
4002--4027
2
13.0
2
100
0
52
50
0
0
50
1.00
4244--4393
74
2.0
74
84
5
196
36
12
12
40
1.79
7519--7563
12
3.5
13
81
9
56
57
11
0
31
1.33
8698--8759
8
8.3
7
81
15
63
3
14
0
82
0.80
8713--8760
13
3.9
12
82
12
62
0
14
0
85
0.60
8704--8760
18
3.1
19
85
10
82
1
14
0
84
0.71
8857--8917
18
3.3
18
72
17
52
0
39
40
19
1.52
8864--8930
14
5.0
14
71
22
54
1
38
41
17
1.59
8846--8943
38
2.6
38
90
1
151
2
39
40
17
1.61
9738--9991
131
1.9
131
88
3
386
37
13
16
33
1.87

Tables:   1

The End!