Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017508.1 Corchorus olitorius cultivar O-4 contig17541, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21579

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--33
2
16.5
2
100
0
66
51
0
0
48
1.00
1629--1748
60
2.0
60
87
6
172
37
8
11
42
1.72
4621--4666
22
2.1
22
100
0
92
21
17
8
52
1.71
11857--11896
21
2.1
19
86
13
55
20
27
15
37
1.92
13146--13250
31
3.5
31
67
15
83
40
16
20
21
1.91
15313--15355
14
3.1
14
74
12
52
16
13
23
46
1.83
19555--19629
28
2.7
28
77
6
73
40
10
22
26
1.87

Tables:   1

The End!