Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017510.1 Corchorus olitorius cultivar O-4 contig17543, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2153

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1179--2153
25
35.6
28
84
10
906
33
21
15
30
1.94
1373--1454
16
5.2
16
66
16
64
30
15
18
35
1.92
1244--2153
186
4.8
178
79
14
895
33
21
15
29
1.94
1800--2153
27
12.9
31
78
19
311
33
21
13
31
1.92
1840--2153
52
5.9
50
85
9
353
34
21
13
31
1.92
1864--2153
80
3.7
78
85
8
419
33
21
13
31
1.92

Tables:   1

The End!