Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017511.1 Corchorus olitorius cultivar O-4 contig17544, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48490

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6604--6635
4
8.0
4
100
0
64
75
0
25
0
0.81
8294--8350
19
2.9
19
81
5
69
33
17
12
36
1.87
20529--20562
18
1.9
17
88
5
50
73
5
17
2
1.16
26187--26219
17
1.9
17
88
11
50
0
9
6
84
0.76
30447--30825
188
2.0
188
100
0
758
37
17
14
29
1.90
39203--39379
88
2.0
88
97
0
336
33
11
11
44
1.76

Tables:   1

The End!