Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017512.1 Corchorus olitorius cultivar O-4 contig17545, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13806

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4176--4419
119
2.0
119
97
0
461
36
16
19
27
1.93
9254--9286
2
16.5
2
100
0
66
51
0
0
48
1.00
10674--10713
11
3.2
13
80
20
50
10
0
12
77
0.99
10688--10713
11
2.4
11
100
0
52
7
0
15
76
0.99
12103--12153
25
2.0
25
100
0
102
37
11
11
39
1.79
13296--13336
21
2.0
21
85
9
57
43
4
4
46
1.46
13722--13802
38
2.1
38
81
4
92
41
16
9
32
1.81

Tables:   1

The End!