Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017514.1 Corchorus olitorius cultivar O-4 contig17547, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21318

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6345--6387
21
2.0
21
82
8
52
53
9
2
34
1.46
6527--6620
25
4.0
25
69
16
83
44
28
12
13
1.81
6927--6962
18
2.1
18
89
5
56
44
5
11
38
1.63
13736--13809
28
2.7
28
93
2
123
16
13
25
44
1.84
15987--16029
22
1.9
23
85
4
61
25
4
23
46
1.71
18805--19408
35
16.6
36
75
11
536
28
19
23
27
1.99
18807--19408
74
8.3
74
89
5
872
28
19
23
27
1.99
19749--19911
28
5.8
28
89
1
218
16
17
27
38
1.91
20433--20481
25
2.0
24
85
14
66
20
22
10
46
1.80

Tables:   1

The End!