Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017517.1 Corchorus olitorius cultivar O-4 contig17550, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11123

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3463--3642
60
3.0
60
95
1
308
44
11
14
29
1.80
3839--3944
29
3.7
28
84
2
122
40
22
14
22
1.90
4206--4543
35
9.7
35
91
1
468
29
21
19
29
1.97
4206--4543
105
3.2
104
90
5
522
29
21
19
29
1.97
4563--4692
50
2.6
50
88
1
179
30
10
27
31
1.91
4767--4988
50
4.4
50
92
1
381
25
27
13
33
1.93
4767--4988
101
2.2
100
93
0
381
25
27
13
33
1.93
4976--5100
54
2.3
54
92
0
205
25
24
12
38
1.89
8902--8930
14
2.1
14
100
0
58
13
13
27
44
1.82

Tables:   1

The End!