Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017521.1 Corchorus olitorius cultivar O-4 contig17554, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20720

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1798--1839
15
2.7
15
85
3
57
14
7
14
64
1.48
2546--2585
13
2.9
14
85
11
55
2
10
2
85
0.80
7345--7456
39
2.8
39
90
6
165
26
16
7
50
1.70
8045--8123
41
1.9
41
100
0
158
48
22
12
16
1.80
15805--16130
163
2.0
163
96
0
607
39
12
11
35
1.80
17091--17132
2
21.0
2
100
0
84
50
0
0
50
1.00
18161--18213
26
2.0
26
96
0
97
26
26
26
20
1.99
20669--20712
2
22.0
2
100
0
88
50
0
0
50
1.00

Tables:   1

The End!