Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017526.1 Corchorus olitorius cultivar O-4 contig17559, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13497

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1201--1299
29
3.4
28
75
6
90
38
22
18
21
1.93
5240--5270
15
2.1
15
93
0
53
29
25
6
38
1.81
6468--6726
87
3.0
87
97
0
484
33
23
8
34
1.86
8297--8322
2
13.0
2
100
0
52
50
0
0
50
1.00
11115--11188
33
2.2
33
100
0
148
14
32
37
14
1.87
13026--13350
160
2.0
160
99
0
641
33
12
19
35
1.88

Tables:   1

The End!