Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017530.1 Corchorus olitorius cultivar O-4 contig17563, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36363

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6582--6642
5
12.2
5
100
0
122
21
0
59
19
1.39
7900--7933
3
11.3
3
93
0
59
35
0
32
32
1.58
8889--9004
58
2.0
58
94
0
205
23
11
21
43
1.84
15271--15327
30
1.9
30
96
0
105
47
1
22
28
1.61
17202--17247
21
2.1
22
84
8
58
19
17
21
41
1.90
20204--20241
15
2.5
15
91
0
67
39
18
23
18
1.92
34093--34224
49
2.7
48
82
10
142
28
21
6
43
1.78
35516--35609
45
2.2
43
90
7
147
38
22
6
32
1.79

Tables:   1

The End!