Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017531.1 Corchorus olitorius cultivar O-4 contig17564, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18545

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
531--574
3
14.7
3
100
0
88
34
0
0
65
0.93
1895--1932
19
2.0
20
84
5
51
52
18
2
26
1.58
1646--2279
226
2.8
222
84
10
830
41
14
9
33
1.79
1646--2279
238
2.7
236
86
7
859
41
14
9
33
1.79
3354--3406
21
2.5
21
96
0
97
13
30
22
33
1.92
13468--13535
30
2.2
31
92
5
111
25
10
29
35
1.89
13468--13545
31
2.5
30
89
8
113
25
10
28
35
1.89

Tables:   1

The End!