Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017533.1 Corchorus olitorius cultivar O-4 contig17566, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12263

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--64
3
21.7
3
96
3
121
31
34
0
34
1.58
58--160
2
51.5
2
91
3
163
0
51
1
45
1.19
2601--2667
34
1.9
35
90
3
109
44
16
5
32
1.72
6318--6386
34
2.1
34
94
2
122
21
13
11
53
1.70
8139--8167
4
7.2
4
100
0
58
24
0
0
75
0.80
9831--9892
31
2.0
31
93
0
106
41
6
16
35
1.74

Tables:   1

The End!