Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017535.1 Corchorus olitorius cultivar O-4 contig17568, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9625

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--48
3
16.0
3
100
0
96
33
0
0
66
0.92
1102--1148
2
23.0
2
91
4
76
46
2
2
48
1.25
4175--4203
14
2.0
15
93
6
51
65
0
34
0
0.93
6421--6470
13
3.4
15
71
15
50
44
2
6
48
1.39
9582--9611
2
15.0
2
100
0
60
50
0
0
50
1.00

Tables:   1

The End!