Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017539.1 Corchorus olitorius cultivar O-4 contig17572, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22620

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2312--2360
14
3.7
13
78
10
55
48
2
2
46
1.25
2314--2358
16
2.8
16
79
3
54
48
2
2
46
1.26
2314--2352
18
2.2
18
85
0
51
48
0
2
48
1.15
6995--7019
4
6.2
4
100
0
50
48
0
0
52
1.00
15190--15247
5
11.0
5
79
17
64
55
5
0
39
1.22
15525--18703
660
4.8
654
85
5
4035
32
14
18
34
1.91
15525--18702
325
9.7
327
84
5
3831
32
14
18
34
1.91
18709--22331
331
11.0
331
87
3
4861
32
15
18
34
1.92
18709--22331
660
5.5
658
88
4
4897
32
15
18
34
1.92
22082--22579
248
2.0
248
92
1
836
34
12
16
36
1.87

Tables:   1

The End!