Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017542.1 Corchorus olitorius cultivar O-4 contig17575, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  86727

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2235--2259
2
12.5
2
100
0
50
0
52
0
48
1.00
29250--29327
37
2.1
37
92
2
131
48
3
15
32
1.63
35424--35452
6
5.0
6
95
4
51
68
0
31
0
0.89
39926--39958
16
1.9
17
88
11
50
0
18
0
81
0.68
41026--41065
7
5.7
7
96
0
71
42
17
15
25
1.88
43473--43497
11
2.3
11
100
0
50
44
8
0
48
1.32
59261--59295
7
5.1
7
93
3
54
0
54
0
45
0.99
70423--70480
19
2.9
19
76
5
62
37
10
20
31
1.86
71399--71433
6
6.0
6
96
3
63
14
0
0
85
0.59
86038--86090
3
17.7
3
100
0
106
32
0
0
67
0.91

Tables:   1

The End!