Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017543.1 Corchorus olitorius cultivar O-4 contig17576, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48421

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
149--199
21
2.4
22
80
12
61
35
21
3
39
1.72
9750--9819
22
3.2
22
61
15
54
47
14
18
20
1.83
12196--12252
27
2.1
27
90
3
87
26
8
14
50
1.71
14246--14270
2
12.5
2
100
0
50
52
0
0
48
1.00
29839--29875
14
2.4
17
86
13
53
27
5
2
64
1.28
30707--30736
2
15.0
2
92
0
51
50
3
0
46
1.18
42694--47560
333
14.8
332
86
4
6442
31
15
17
35
1.91
42694--47560
983
4.9
983
86
3
6475
31
15
17
35
1.91
47699--48421
333
2.2
332
92
1
1173
31
14
17
36
1.90

Tables:   1

The End!