Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017550.1 Corchorus olitorius cultivar O-4 contig17583, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28519

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6135--6300
81
2.1
80
97
1
278
35
15
18
30
1.92
8181--8206
2
13.0
2
100
0
52
50
0
0
50
1.00
17958--18017
30
2.0
30
90
0
93
43
13
31
11
1.80
20847--20883
1
37.0
1
100
0
74
0
0
0
100
0.00
23766--25437
666
2.5
665
88
2
2505
29
15
18
35
1.92
23766--25437
334
5.0
331
88
2
2390
29
15
18
35
1.92
25844--26166
175
1.8
175
93
0
556
28
23
15
32
1.95
25990--27656
333
5.0
332
85
4
2267
30
16
17
36
1.91
28240--28277
18
2.1
19
90
5
60
28
13
18
39
1.88

Tables:   1

The End!