Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017553.1 Corchorus olitorius cultivar O-4 contig17586, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  62943

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3732--3786
21
2.6
21
76
0
56
14
38
36
10
1.81
16761--16788
11
2.5
11
100
0
56
7
0
14
78
0.95
36818--36850
12
2.6
13
85
9
50
87
0
12
0
0.53
42302--42342
20
2.0
20
90
0
64
48
17
12
21
1.79
49506--49538
8
4.1
8
85
14
50
63
0
36
0
0.95
55719--55765
24
2.0
24
95
0
85
27
6
21
44
1.76
59966--60980
332
3.1
330
87
1
1417
33
15
15
35
1.89
61125--62164
332
3.1
332
90
3
1549
32
15
15
36
1.89

Tables:   1

The End!