Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017556.1 Corchorus olitorius cultivar O-4 contig17589, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5292

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
326--1304
517
1.9
516
92
2
1626
30
16
16
36
1.91
842--1852
327
3.1
326
84
5
1316
33
15
16
35
1.90
2005--2954
320
2.9
323
83
7
1118
32
16
15
35
1.90
4825--5106
62
4.5
62
96
0
519
34
22
39
3
1.70
5078--5144
34
2.0
34
96
0
125
47
16
32
2
1.62
5264--5288
2
12.5
2
100
0
50
48
0
52
0
1.00

Tables:   1

The End!