Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017559.1 Corchorus olitorius cultivar O-4 contig17592, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  41555

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
6039--6305
133
2.0
130
92
5
439
38
18
22
20
1.93
8869--8924
21
2.8
21
83
5
71
37
7
21
33
1.81
18286--18603
162
2.0
159
90
3
503
23
23
17
34
1.96
18756--18795
21
1.9
21
94
0
71
0
32
10
57
1.32
20471--20519
25
1.9
26
91
4
82
53
12
10
24
1.69
33118--33142
2
12.5
2
100
0
50
48
0
0
52
1.00

Tables:   1

The End!