Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017560.1 Corchorus olitorius cultivar O-4 contig17593, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24774

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3233--3277
16
2.9
15
80
6
63
24
0
15
60
1.36
4274--4333
30
2.0
30
86
0
84
16
30
23
30
1.96
5325--5363
6
7.2
6
78
21
50
38
0
0
61
0.96
5329--5357
10
2.9
10
100
0
58
37
0
0
62
0.96
5325--5364
16
2.5
15
88
8
53
40
0
0
60
0.97
5254--5422
94
1.8
92
97
2
320
39
9
9
42
1.70
6498--6581
42
2.0
42
85
0
114
33
15
19
32
1.93
18730--21155
325
7.5
325
92
2
3868
30
16
17
35
1.92
22051--22077
14
1.9
14
100
0
54
66
11
0
22
1.22
22056--22102
24
2.0
23
84
16
60
65
6
2
25
1.27
22459--24742
325
7.0
326
87
3
3079
32
15
16
35
1.91

Tables:   1

The End!