Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017566.1 Corchorus olitorius cultivar O-4 contig17599, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15079

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3--1033
320
3.2
322
89
2
1548
34
16
13
34
1.89
3399--3635
84
2.8
83
85
2
312
22
12
33
32
1.91
3346--3635
42
6.9
42
73
2
197
24
12
32
30
1.92
3445--3659
84
2.6
84
80
5
231
20
14
32
32
1.93
14644--14668
5
5.0
5
100
0
50
80
20
0
0
0.72
14954--14999
2
23.5
2
86
4
67
50
0
47
2
1.13

Tables:   1

The End!