Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017577.1 Corchorus olitorius cultivar O-4 contig17610, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  36703

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13934--13983
1
50.0
1
89
0
64
92
2
2
4
0.52
13929--13982
26
2.1
26
96
0
99
87
3
1
7
0.74
21946--21983
13
2.6
14
84
15
51
28
2
28
39
1.70
23842--23889
1
48.0
1
82
0
60
0
0
8
91
0.41
23838--23886
9
5.3
9
90
4
80
0
0
10
89
0.48
23842--23889
21
2.3
21
92
7
80
0
0
8
91
0.41
33888--33951
32
2.0
32
100
0
128
28
9
25
37
1.87
34015--34051
8
4.4
8
87
12
56
24
21
0
54
1.45
34975--35003
2
14.5
2
100
0
58
48
0
0
51
1.00
35157--36703
322
4.8
321
80
8
1573
32
14
17
35
1.90
35161--36683
648
2.4
621
82
7
1800
32
13
17
35
1.90

Tables:   1

The End!