Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017578.1 Corchorus olitorius cultivar O-4 contig17611, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12166

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26--2216
331
6.6
330
83
4
2765
37
13
14
34
1.86
3379--3455
31
2.5
31
86
0
109
37
25
22
14
1.92
4059--4148
45
2.0
45
97
0
171
25
13
13
47
1.79
10970--11338
20
18.5
20
69
11
229
35
7
26
30
1.84
10971--11338
40
9.2
40
86
5
514
35
7
26
30
1.83

Tables:   1

The End!