Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017582.1 Corchorus olitorius cultivar O-4 contig17615, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15061

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--83
2
41.5
2
100
0
166
0
49
0
50
1.00
8800--10407
333
4.8
331
79
7
1464
34
16
14
33
1.90
8800--12275
332
10.5
332
73
11
1813
35
15
15
33
1.89
10521--11426
319
2.8
317
80
7
902
36
15
15
32
1.89
10641--12091
327
4.5
324
75
9
1165
35
15
16
32
1.90
12411--13594
321
3.7
319
81
6
1216
36
16
15
32
1.89
13657--15043
333
4.2
330
76
8
954
35
15
15
33
1.90
14295--15048
333
2.3
333
86
2
1021
34
16
14
33
1.90

Tables:   1

The End!