Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017585.1 Corchorus olitorius cultivar O-4 contig17618, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29507

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
898--933
11
3.3
11
84
0
54
36
41
8
13
1.75
3629--3661
8
3.7
9
88
12
50
33
0
0
66
0.92
5377--5434
21
2.9
19
87
9
89
34
10
18
36
1.85
6699--6752
27
2.0
27
100
0
108
51
11
0
37
1.37
7391--7481
45
2.0
45
100
0
182
31
26
8
32
1.87
19418--19442
12
2.1
12
100
0
50
56
24
20
0
1.43
21427--21462
2
18.0
2
100
0
72
50
0
50
0
1.00
27372--27440
34
2.0
34
94
0
120
23
17
20
39
1.92
27471--27527
16
3.4
16
69
21
53
19
1
22
56
1.51
27469--27540
35
2.1
35
100
0
144
16
2
26
54
1.56

Tables:   1

The End!