Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017586.1 Corchorus olitorius cultivar O-4 contig17619, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34940

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
409--437
2
14.5
2
100
0
58
51
0
0
48
1.00
7635--7674
2
20.5
2
84
5
55
47
0
0
52
1.00
23749--23792
9
4.9
9
82
0
52
43
40
13
2
1.57
29850--29880
2
15.5
2
93
0
53
51
3
0
45
1.17
31552--34940
334
10.2
333
87
3
4774
31
16
18
34
1.93

Tables:   1

The End!