Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017589.1 Corchorus olitorius cultivar O-4 contig17622, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25413

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15199--15223
12
2.1
12
100
0
50
8
16
52
24
1.70
17440--17536
4
24.5
4
91
2
70
2
37
11
49
1.50
17442--17535
8
11.9
8
90
2
91
2
36
11
50
1.51
17454--17508
12
4.6
12
95
0
92
3
25
20
50
1.64
17440--17536
12
8.2
12
89
1
88
2
37
11
49
1.50
17740--17809
3
23.3
3
94
0
122
31
0
0
68
0.90
25229--25264
2
18.0
2
100
0
72
50
0
0
50
1.00

Tables:   1

The End!