Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017593.1 Corchorus olitorius cultivar O-4 contig17626, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21914

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
118--172
29
1.9
28
92
3
92
29
10
20
40
1.86
1147--1187
22
1.9
22
90
5
66
29
0
17
53
1.44
991--1574
292
2.0
290
88
3
877
25
15
16
42
1.87
1649--1700
27
1.9
27
88
7
79
34
1
11
51
1.49
3117--3316
88
2.3
90
94
2
361
25
25
18
31
1.97
3459--3535
40
1.9
40
89
5
120
46
16
5
31
1.69
3706--3743
17
2.2
17
86
9
51
44
2
21
31
1.66
6847--6886
19
2.2
19
86
4
55
47
7
17
27
1.74
9002--9051
13
4.2
12
78
17
59
76
2
8
14
1.10
9000--9046
23
2.0
23
88
12
69
74
2
10
12
1.16
14546--14643
48
2.0
48
94
0
169
43
18
10
27
1.82
15076--15117
21
2.0
21
85
0
57
30
28
11
28
1.92

Tables:   1

The End!