Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017595.1 Corchorus olitorius cultivar O-4 contig17628, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19657

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2217--2533
119
2.6
122
80
11
346
23
18
19
38
1.94
2946--2997
27
2.0
26
85
7
70
30
5
15
48
1.68
6038--6077
20
2.0
20
100
0
80
50
5
10
35
1.58
10440--10477
9
4.3
9
90
3
60
47
0
18
34
1.49
11743--11883
49
2.9
47
79
11
160
27
16
5
50
1.67
12702--12751
15
3.3
15
91
0
73
42
14
26
18
1.87

Tables:   1

The End!