Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017606.1 Corchorus olitorius cultivar O-4 contig17639, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15560

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4978--5063
43
2.0
43
100
0
172
30
11
34
23
1.90
5434--5476
21
2.0
21
100
0
86
39
9
23
27
1.85
10335--10498
89
1.8
89
89
0
256
39
18
7
34
1.79
10814--10870
27
2.2
25
77
17
62
36
10
15
36
1.82
10876--10902
13
2.1
13
100
0
54
48
7
14
29
1.71
11523--11664
49
3.0
47
84
9
171
51
7
14
27
1.67

Tables:   1

The End!