Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017611.1 Corchorus olitorius cultivar O-4 contig17644, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13679

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1194--1219
9
2.9
9
100
0
52
30
11
0
57
1.34
7591--7698
54
2.0
54
96
0
198
37
22
12
27
1.91
8201--8256
28
2.0
28
100
0
112
35
14
25
25
1.93
9954--9987
17
1.9
18
94
5
61
58
5
0
35
1.22
9954--9988
18
1.9
18
94
0
61
60
5
0
34
1.21
10289--10368
29
2.7
30
86
3
99
30
18
11
40
1.86
10492--10577
31
2.8
31
94
0
154
43
12
16
27
1.84
10849--10939
37
2.5
37
96
3
166
32
25
12
29
1.92
11229--11467
126
1.9
125
84
4
320
35
10
1
52
1.43
11553--11584
15
2.1
15
94
0
55
78
0
21
0
0.76
11553--11584
7
4.2
8
84
15
50
78
0
21
0
0.76
11626--11709
31
2.7
32
88
5
127
33
13
10
42
1.78

Tables:   1

The End!