Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017612.1 Corchorus olitorius cultivar O-4 contig17645, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  38072

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2192--2241
26
2.1
24
82
14
59
26
0
10
64
1.25
12505--12560
28
2.0
28
92
0
94
25
5
21
48
1.71
18960--19078
37
3.1
37
67
23
102
45
10
8
36
1.68
18958--19080
40
3.2
40
69
19
123
44
9
8
37
1.67
18939--19088
77
1.9
77
93
0
255
45
10
10
34
1.71
19612--19662
23
2.0
25
82
14
61
41
1
5
50
1.37
19982--20017
19
1.9
18
88
5
54
41
8
22
27
1.82
20010--20075
28
2.4
28
100
0
132
50
9
15
25
1.73
28572--28598
2
13.5
2
100
0
54
51
0
0
48
1.00

Tables:   1

The End!