Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017619.1 Corchorus olitorius cultivar O-4 contig17652, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33481

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5060--5084
13
1.9
13
100
0
50
40
8
4
48
1.51
9576--9609
2
17.5
2
93
6
61
52
0
0
47
1.00
10225--10255
2
15.5
2
100
0
62
48
0
0
51
1.00
13373--13403
6
5.2
6
100
0
62
16
0
48
35
1.46
24403--24497
45
2.2
44
87
7
133
36
21
6
35
1.79
25724--25764
3
14.0
3
94
5
75
65
0
0
34
0.93
27173--27203
15
2.1
15
93
0
53
64
0
0
35
0.94

Tables:   1

The End!