Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017637.1 Corchorus olitorius cultivar O-4 contig17670, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23194

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
518--552
5
7.0
5
93
0
61
57
0
42
0
0.99
780--826
19
2.3
21
82
7
53
63
10
4
21
1.43
2690--2813
32
3.9
32
93
2
205
25
29
15
29
1.96
10551--10601
26
1.9
26
84
11
68
35
17
1
45
1.60
12153--12209
16
3.6
16
76
4
62
8
12
40
38
1.74
12617--12654
20
1.9
19
89
5
58
65
15
5
13
1.43
15275--15320
22
2.0
22
87
4
65
15
43
28
13
1.83
19357--19474
62
1.9
62
82
3
148
10
30
40
18
1.84

Tables:   1

The End!