Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017640.1 Corchorus olitorius cultivar O-4 contig17673, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23329

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4028--4117
27
3.3
28
77
10
87
36
28
17
16
1.92
4045--4119
27
2.7
27
83
6
89
37
25
18
18
1.94
9714--9758
21
2.1
21
83
0
54
26
15
37
20
1.92
11939--12203
4
67.5
4
65
14
79
63
0
10
26
1.30
12044--12179
19
7.4
18
74
17
86
61
0
8
28
1.31
12054--12208
27
6.4
27
69
28
116
65
0
7
27
1.23
12045--12201
46
3.4
46
97
0
289
63
0
8
28
1.28
12081--12199
19
6.4
19
67
21
65
64
0
7
27
1.20
19965--20135
90
1.9
91
84
6
231
28
15
24
31
1.96
19990--20251
90
2.9
89
78
9
273
24
15
26
32
1.95

Tables:   1

The End!