Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017643.1 Corchorus olitorius cultivar O-4 contig17676, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17277

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1119--1281
82
2.0
81
89
3
247
40
12
0
47
1.41
1886--1916
7
4.4
7
100
0
62
0
0
38
61
0.96
6591--6627
19
1.9
19
100
0
74
54
13
5
27
1.61
9041--9067
2
13.5
2
100
0
54
48
0
0
51
1.00
11175--11235
21
2.9
21
81
13
72
18
19
11
50
1.76
12521--12554
17
2.1
17
94
5
61
61
5
11
20
1.50
15406--15566
70
2.3
69
92
1
268
19
29
24
26
1.98
16554--16597
22
2.0
22
90
4
70
2
22
2
72
1.07

Tables:   1

The End!