Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017647.1 Corchorus olitorius cultivar O-4 contig17680, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22851

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1867--1908
21
2.0
21
85
0
57
33
26
9
30
1.88
2484--2532
21
2.4
21
77
16
57
67
6
8
18
1.37
8499--8539
13
3.1
13
83
16
57
24
0
0
75
0.80
9199--9298
22
4.5
22
79
7
98
45
14
21
20
1.85
9200--9303
44
2.4
44
78
12
108
46
13
21
19
1.84
15697--15732
18
2.0
18
100
0
72
11
11
27
50
1.72

Tables:   1

The End!