Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01017653.1 Corchorus olitorius cultivar O-4 contig17686, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17317

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
192--275
30
2.8
29
77
13
91
21
21
14
42
1.88
4256--4293
19
2.0
19
94
0
67
60
5
13
21
1.52
4256--4294
10
4.0
10
86
6
62
58
7
12
20
1.58
4474--4506
17
1.9
17
93
0
57
63
15
0
21
1.30
5308--5376
30
2.4
29
81
9
79
47
2
2
46
1.32
13826--13876
21
2.4
21
100
0
102
17
27
41
13
1.87
15999--16109
28
4.3
24
77
19
93
37
13
8
40
1.74
16008--16108
25
4.0
24
77
16
91
39
14
8
36
1.78
16066--16131
30
2.2
30
81
5
80
37
18
7
36
1.79
15975--16120
78
1.9
78
80
13
176
34
13
9
42
1.77
16523--16564
15
2.7
15
96
3
75
66
14
7
11
1.43

Tables:   1

The End!